The Virtual Cell Model  1.0
ECM Member List

This is the complete list of members for ECM, including all inherited members.

add_to_force(double force, int index, int coor)ECMinline
assign_key_value(string key, string value)ECMinline
Average_node_pair_lengthECMprivate
check(void)ECMprivate
COM_positionECMprivate
COM_velocityECMprivate
Dashpot_ViscosityECMprivate
ECM()ECMinline
epsilonECMprivate
epsilon_LJ_12_6ECMprivate
export_for_resume(int MD_step)ECM
export_for_resume(int MD_step, MyAtomInfo atoms[], int atom_count)ECM
ext_force_modelECMprivate
file_timeECMprivate
get_avg_node_dist(void)ECMinline
get_epsilon(void)ECMinline
get_epsilon_LJ_12_6(void)ECMinline
get_ext_force_model(void)ECMinline
get_insertOrder()ECMinline
get_interaction_range(void)ECMinline
get_kx(void)ECMinline
get_ky(void)ECMinline
get_kz(void)ECMinline
get_label(void)ECMinline
get_map()ECMinline
get_node_mass(void)ECMinline
get_node_pair(int bond_num, int node_id)ECMinline
get_node_position(int node_number, int node_coordinate)ECMinline
get_node_radius(void)ECMinline
get_node_velocity(int node_number, int node_coordinate)ECMinline
get_num_of_node_pairs(void)ECMinline
get_num_of_nodes(void)ECMinline
get_num_of_triangles(void)ECMinline
get_receptor_center_x(void)ECMinline
get_receptor_center_y(void)ECMinline
get_receptor_center_z(void)ECMinline
get_receptor_density(void)ECMinline
get_receptor_gradient_x(void)ECMinline
get_receptor_gradient_y(void)ECMinline
get_receptor_gradient_z(void)ECMinline
get_receptor_type(void)ECMinline
get_sigma(void)ECMinline
get_sigma_LJ_12_6(void)ECMinline
get_spring_model(void)ECMinline
get_spring_stiffness_coefficient(void)ECMinline
get_stiffness_gradient_x(void)ECMinline
get_stiffness_gradient_y(void)ECMinline
get_stiffness_gradient_z(void)ECMinline
import_config(vector< string > configlines)ECM
indexECMprivate
initialise(int dimension)ECMprivate
insertOrderECM
interaction_rangeECMprivate
Kelvin_Damping_CoefficientECMprivate
kxECMprivate
kyECMprivate
kzECMprivate
labelECMprivate
Max_node_pair_lengthECMprivate
Mesh_file_nameECMprivate
Min_node_pair_lengthECMprivate
Node_Bond_identifier_2D(void)ECMprivate
Node_Bond_identifier_3D(void)ECMprivate
Node_Bond_identifier_3D_square(void)ECMprivate
Node_Bond_listECMprivate
Node_ForceECMprivate
Node_MassECMprivate
Node_neighbour_listECMprivate
Node_neighbour_list_constructor(void)ECMprivate
Node_PositionECMprivate
Node_radiusECMprivate
Node_VelocityECMprivate
normal_direction_Identifier(double x, double y, double z)ECMprivate
normal_direction_Identifier(void)ECMprivate
Num_of_Node_PairsECMprivate
Num_of_NodesECMprivate
Num_of_Triangle_PairsECMprivate
Num_of_TrianglesECMprivate
output_file_nemeECM
param_mapECMprivate
ParamsECM
Pyramid_NodesECMprivate
read_gmesh_file_2D(std::string gmesh_file)ECMprivate
read_gmesh_file_3D(std::string gmesh_file)ECMprivate
read_gmesh_file_3D_square(std::string gmesh_file)ECMprivate
receptor_center_xECMprivate
receptor_center_yECMprivate
receptor_center_zECMprivate
receptor_densityECMprivate
receptor_gradient_xECMprivate
receptor_gradient_yECMprivate
receptor_gradient_zECMprivate
receptor_typeECMprivate
rescale_factorECMprivate
set_FENE_param(double &le0, double &le1, double &lmin, double &lmax)ECMinline
set_file_time(char *buffer)ECMinline
set_index(int ind)ECMinline
set_interaction_range(double range)ECMinline
set_label(std::string lab)ECMinline
set_state(MyAtomInfo all_atoms[], int atom_count)ECM
Shift_in_X_directionECMprivate
Shift_in_Y_directionECMprivate
Shift_in_Z_directionECMprivate
shift_node_positions(void)ECMinline
shift_velocity(double vx, double vy, double vz)ECMinline
sigmaECMprivate
sigma_LJ_12_6ECMprivate
Spring_coefficientECMprivate
spring_modelECMprivate
square_NodesECMprivate
stiffness_gradient_xECMprivate
stiffness_gradient_yECMprivate
stiffness_gradient_zECMprivate
Triangle_ListECMprivate
update_COM_position(void)ECMinline
update_COM_velocity(void)ECMinline
valuesECM
x_speedECMprivate
y_speedECMprivate
z_speedECMprivate