The Virtual Cell Model  1.0
Actin Member List

This is the complete list of members for Actin, including all inherited members.

abp_Bond_listActinprivate
abp_Bond_relaxed_lengthActinprivate
abp_forceActinprivate
abp_hill_coActinprivate
abp_k1Actinprivate
abp_k2Actinprivate
abp_modelActinprivate
abp_r0factorActinprivate
abp_rmaxActinprivate
abp_rminActinprivate
abp_Spring_coefficientActinprivate
abp_spring_modelActinprivate
abpsActinprivate
act_r0factorActinprivate
Actin()Actininline
Actin_Membrane_shared_Node_listActin
add_to_force(double force, int index, int coor)Actininline
assign_key_value(string key, string value)Actininline
assign_parameters(void)Actin
Average_abp_pair_lengthActinprivate
Average_MT_pair_lengthActinprivate
Average_node_pair_lengthActinprivate
check(void)Actin
check_2(void)Actin
check_3(void)Actin
COM_positionActinprivate
COM_velocityActinprivate
consistancy_check(void)Actin
Contractile_forceActinprivate
contractile_hill_coActinprivate
Contractile_k1Actinprivate
Contractile_k2Actinprivate
contractile_modelActinprivate
Contractile_rmaxActinprivate
Contractile_rminActinprivate
Damping_coefficientActinprivate
Dashpot_ViscosityActinprivate
Elastic_Force_Calculator(void)Actin
exp_tauActinprivate
export_for_resume(int MD_step)Actin
export_for_resume(int MD_step, MyAtomInfo atoms[], int atom_count)Actin
ext_force_modelActinprivate
filamentsActinprivate
file_timeActinprivate
get_abp_force(void)Actininline
get_abp_hill_co(void)Actininline
get_abp_k1(void)Actininline
get_abp_k2(void)Actininline
get_abp_model(void)Actininline
get_abp_pair(int bond_num, int node_id)Actininline
get_abp_r0factor(void)Actininline
get_abp_relaxlength(int bond_number)Actininline
get_abp_rmax(void)Actininline
get_abp_rmin(void)Actininline
get_abp_spring_model(void)Actininline
get_abp_spring_stiffness_coefficient(void)Actininline
get_act_r0factor(void)Actininline
get_avg_abp_dist(void)Actininline
get_avg_MT_dist(void)Actininline
get_avg_node_dist(void)Actininline
get_contractile_force(void)Actininline
get_contractile_hill_co(void)Actininline
get_contractile_k1(void)Actininline
get_contractile_k2(void)Actininline
get_contractile_model(void)Actininline
get_contractile_rmax(void)Actininline
get_contractile_rmin(void)Actininline
get_ext_force_model(void)Actininline
get_insertOrder()Actininline
get_kelvin_damping_coefficient(void)Actininline
get_kx(void)Actininline
get_ky(void)Actininline
get_kz(void)Actininline
get_label(void)Actininline
get_map()Actininline
get_MT_force(void)Actininline
get_MT_hill_co(void)Actininline
get_MT_k1(void)Actininline
get_MT_k2(void)Actininline
get_MT_model(void)Actininline
get_MT_pair(int bond_num, int node_id)Actininline
get_MT_r0factor(void)Actininline
get_MT_relaxlength(int bond_number)Actininline
get_MT_rmax(void)Actininline
get_MT_rmin(void)Actininline
get_MT_spring_model(void)Actininline
get_MT_spring_stiffness_coefficient(void)Actininline
get_node_mass(void)Actininline
get_node_pair(int bond_num, int node_id)Actininline
get_node_pair_Nominal_Length_in_Nm(int bond_number)Actininline
get_node_position(int node_number, int node_coordinate)Actininline
get_node_radius(int index)Actininline
get_node_velocity(int node_number, int node_coordinate)Actininline
get_num_of_abp_pairs(void)Actininline
get_num_of_MT_pairs(void)Actininline
get_num_of_node_pairs(void)Actininline
get_num_of_nodes(void)Actininline
get_spring_model(void)Actininline
get_spring_stiffness_coefficient(void)Actininline
Hookian(double distance, double initial_distance)Actinprivate
import_config(vector< string > configlines)Actin
indexActinprivate
initialise(std::string Mesh_file_name)Actinprivate
initialise_abp_bond_relaxed_length(void)Actinprivate
initialise_MT_bond_relaxed_length(void)Actinprivate
initialise_node_bond_relaxed_length(void)Actinprivate
insertOrderActin
Kelvin(double distance, int bond_index)Actinprivate
Kelvin_Damping_CoefficientActinprivate
kxActinprivate
kyActinprivate
kzActinprivate
labelActinprivate
Max_abp_pair_lengthActinprivate
Max_MT_pair_lengthActinprivate
Max_node_pair_lengthActinprivate
Maxwell(double distance, int bond_index)Actinprivate
Mesh_file_nameActinprivate
mesh_formatActinprivate
MeshTypeActinprivate
Min_abp_pair_lengthActinprivate
Min_MT_pair_lengthActinprivate
Min_node_pair_lengthActinprivate
MT_Bond_listActinprivate
MT_Bond_relaxed_lengthActinprivate
MT_forceActinprivate
MT_hill_coActinprivate
MT_k1Actinprivate
MT_k2Actinprivate
MT_modelActinprivate
MT_r0factorActinprivate
MT_rmaxActinprivate
MT_rminActinprivate
MT_Spring_coefficientActinprivate
MT_spring_modelActinprivate
MTsActinprivate
Node_Bond_identifier(void)Actinprivate
Node_Bond_identifier_2(void)Actinprivate
Node_Bond_identifier_3(void)Actinprivate
Node_Bond_listActinprivate
Node_Bond_Nominal_Length_in_NmActinprivate
Node_Bond_Nominal_Length_statActinprivate
Node_Bond_user_defined_Nominal_Length_in_NmActinprivate
Node_ForceActinprivate
Node_MassActinprivate
Node_neighbour_listActinprivate
Node_neighbour_list_constructor()Actinprivate
Node_neighbour_list_respective_bond_indexActinprivate
Node_PositionActinprivate
Node_radiusActinprivate
Node_radius_statActinprivate
Node_VelocityActinprivate
Num_of_abp_PairsActinprivate
Num_of_Actin_Membrane_shared_NodesActin
Num_of_MT_PairsActinprivate
Num_of_Node_PairsActinprivate
Num_of_NodesActinprivate
output_file_nemeActinprivate
param_mapActinprivate
ParamsActin
Pyramid_NodesActinprivate
read_actin_file(void)Actinprivate
read_gmesh_file(std::string gmesh_file)Actinprivate
read_gmesh_file_2(std::string gmesh_file)Actinprivate
rescale_factorActinprivate
return_ActMem_shared_act_atom(int mem, int bond)Actininline
return_ActMem_shared_mem_atom(int mem, int bond)Actininline
return_num_of_actin_membrane_shared_nodes(int j)Actininline
set_bond_nominal_length(void)Actinprivate
set_file_time(char *buffer)Actininline
set_index(int ind)Actininline
set_label(std::string lab)Actininline
set_node_radius(void)Actinprivate
set_state(MyAtomInfo all_atoms[], int atom_count)Actin
shift_position(double x, double y, double z)Actininline
Shift_position_xyzVectorActinprivate
Shift_velocities_xyzVectorActinprivate
shift_velocity(double vx, double vy, double vz)Actininline
Spring_coefficientActinprivate
spring_modelActinprivate
tau_Maxwell_relaxActinprivate
Total_Kinetic_EnergyActinprivate
Total_Potential_EnergyActinprivate
update_COM_position(void)Actininline
update_COM_velocity(void)Actininline
valuesActin